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Cambridge researchers recognised as Future Leaders by UKRI

Mon, 04/12/2023 - 09:23

Future Leaders Fellowships are awarded by UK Research and Innovation (UKRI) to support universities and businesses in developing their most talented early career researchers and innovators, and to attract new people to their organisations, including from overseas.

The 75 “most promising research leaders” recognised today by UKRI will benefit from £101 million to tackle major global issues and to commercialise their innovations in the UK.

UKRI Chief Executive, Professor Dame Ottoline Leyser, said: “UKRI’s Future Leaders Fellowships provide researchers and innovators with long-term support and training, giving them the freedom to explore adventurous new ideas, and to build dynamic careers that break down the boundaries between sectors and disciplines.

“The fellows announced today illustrate how this scheme empowers talented researchers and innovators to build the diverse and connected research and innovation system we need to shorten the distance between discovery and prosperity across the UK.”

The four Cambridge researchers are:

Dr Alecia-Jane Twigger (Department of Pharmacology) (pictured)

Breastfeeding has been highlighted by the World Health Organization (WHO) as “one of the most effective ways to ensure child health and survival”. A major priority of the WHO is to increase the global rate of exclusive breastfeeding for the first 6 months up to at least 50% by 2025. However, many mothers worry about low milk production – a major driver for mothers switching to formula feeding. With funding provided by the Future Leaders Fellowship, Dr Twigger will establish state-of-the-art models of lactation with the aim of developing and trialling treatments to support low-milk production mothers in partnership with breastfeeding advocates and clinical stakeholders.

Dr Amy Orben (MRC Cognition and Brain Sciences Unit and Fellow of St John's College)

Dr Amy Orben will pinpoint how social media use might be linked to mental health risk in teenagers, a time when we are especially susceptible to developing mental health conditions. She will use a range of innovative techniques to study technological designs, such as the quantification of social feedback through ‘like’ counts, that could be problematic and therefore a target for future regulation. As a UKRI Future Leader Fellow, Dr Orben will also collaborate flexibly with youth, policymakers and charities to swiftly address pressing questions about social media and technology, helping to safeguard young people.

Dr Anna Moore (Department of Psychiatry)

Seventy percent of children suffering mental health problems are unable to access services and those who can are waiting longer than ever for help. Working with children, families and Cambridge Children’s Hospital project, Dr Anna Moore is developing easy-to-use digital tools to revolutionise mental health treatment for the young, by helping clinicians diagnose conditions much earlier. The system, called Timely, will use AI to analyse patient data, joining the dots to spot the early signs of mental health conditions. The tool will be designed to reduce health inequality, improve service efficiency and ensure data use is ethical and publicly acceptable.

Dr Niamh Gallagher (Faculty of History and Fellow of St Catharine’s College)

Dr Gallagher will lead ground-breaking historical research into one of the greatest geopolitical transformations of the 20th century, the disappearance of the British Empire, by investigating how Ireland, the Irish and a series of so-called ‘Irish Questions’ influenced the multifarious 'ends' of the Empire, from 1886 to today. With partners spanning education, public policy and the media, this research will produce a series of innovative outputs and shareable recommendations that facilitate pathways to cohesion in post-conflict Northern Ireland and enhance British–Irish relations in the aftermath of Brexit.

Four researchers are among the UK’s “most promising research leaders” who will benefit from £101 million from UKRI to tackle major global issues and commercialise their innovations.

The fellows announced today illustrate how this scheme empowers talented researchers and innovators to build the diverse and connected research and innovation system we need to shorten the distance between discovery and prosperity across the UK.Ottoline Leyser, UKRI Chief ExecutiveAlecia-Jane Twigger, one of the Future Leaders


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Yes

Why reading nursery rhymes and singing to babies may help them to learn language

Thu, 30/11/2023 - 16:53

Parents should speak to their babies using sing-song speech, like nursery rhymes, as soon as possible, say researchers. That’s because babies learn languages from rhythmic information, not phonetic information, in their first months.

Phonetic information – the smallest sound elements of speech, typically represented by the alphabet – is considered by many linguists to be the foundation of language. Infants are thought to learn these small sound elements and add them together to make words. But a new study suggests that phonetic information is learnt too late and slowly for this to be the case.

Instead, rhythmic speech helps babies learn language by emphasising the boundaries of individual words and is effective even in the first months of life.

Researchers from the University of Cambridge and Trinity College Dublin investigated babies’ ability to process phonetic information during their first year.

Their study, published today in the journal Nature Communications, found that phonetic information wasn’t successfully encoded until seven months old, and was still sparse at 11 months old when babies began to say their first words.

“Our research shows that the individual sounds of speech are not processed reliably until around seven months, even though most infants can recognise familiar words like ‘bottle’ by this point,” said Cambridge neuroscientist, Professor Usha Goswami. “From then individual speech sounds are still added in very slowly – too slowly to form the basis of language.”

The researchers recorded patterns of electrical brain activity in 50 infants at four, seven and eleven months old as they watched a video of a primary school teacher singing 18 nursery rhymes to an infant. Low frequency bands of brainwaves were fed through a special algorithm, which produced a ‘read out’ of the phonological information that was being encoded.  

The researchers found that phonetic encoding in babies emerged gradually over the first year of life, beginning with labial sounds (e.g. d for “daddy”) and nasal sounds (e.g. m for “mummy”), with the ‘read out’ progressively looking more like that of adults

First author, Professor Giovanni Di Liberto, a cognitive and computer scientist at Trinity College Dublin and a researcher at the ADAPT Centre, said: “This is the first evidence we have of how brain activity relates to phonetic information changes over time in response to continuous speech.”

Previously, studies have relied on comparing the responses to nonsense syllables, like “bif” and “bof” instead.

The current study forms part of the BabyRhythm project led by Goswami, which is investigating how language is learnt and how this is related to dyslexia and developmental language disorder. 

Goswami believes that it is rhythmic information – the stress or emphasis on different syllables of words and the rise and fall of tone – that is the key to language learning. A sister study, also part of the BabyRhythm project, has shown that rhythmic speech information was processed by babies at two months old – and individual differences predicted later language outcomes. The experiment was also conducted with adults who showed an identical ‘read out’ of rhythm and syllables to babies.

“We believe that speech rhythm information is the hidden glue underpinning the development of a well-functioning language system,” said Goswami. “Infants can use rhythmic information like a scaffold or skeleton to add phonetic information on to. For example, they might learn that the rhythm pattern of English words is typically strong-weak, as in ‘daddy’ or ‘mummy’, with the stress on the first syllable. They can use this rhythm pattern to guess where one word ends and another begins when listening to natural speech.”

“Parents should talk and sing to their babies as much as possible or use infant directed speech like nursery rhymes because it will make a difference to language outcome,” she added.

Goswami explained that rhythm is a universal aspect of every language all over the world. “In all language that babies are exposed to there is a strong beat structure with a strong syllable twice a second. We’re biologically programmed to emphasise this when speaking to babies.”

Goswami says that there is a long history in trying to explain dyslexia and developmental language disorder in terms of phonetic problems but that the evidence doesn’t add up. She believes that individual differences in children’s language originate with rhythm. 

The research was funded by the European Research Council under the European Union’s Horizon 2020 research and innovation programme and by Science Foundation Ireland. 

Di Liberto et al. Emergence of the cortical encoding of phonetic features in the first year of life, Nature Communications DOI: 10.1038/s41467-023-43490-x

Researchers find that babies don’t begin to process phonetic information reliably until seven months old which they say is too late to form the foundation of language.

We believe that speech rhythm information is the hidden glue underpinning the development of a well-functioning language system.Professor Usha GoswamiCentre for Neuroscience in Education, University of CambridgeBabies wearing 'head cap' to measure electrical brain activity


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Yes

Four Cambridge researchers awarded consolidator grants from the European Research Council

Wed, 22/11/2023 - 12:54

The grants are part of the European Union’s Horizon Europe programme. They are given to excellent scientists and scholars at the career stage to support them to pursue their most promising scientific ideas.

Cambridge scientists, Professor Chiara Ciccarelli, Professor Rosana Collepardo-Guevara, Professor Jason Miller, and Dr Jenny Zhang have been named as awardees of ERC consolidator grants. 

Professor Chiara Ciccarelli

Chiara Ciccarelli is Professor of Physics at the Cavendish Laboratory at the Department of Physics. She is a Royal Society University Research Fellow and a Fellow and Director of Studies at St Catharine's College. She said: “Our group studies magnets and seeks ways to write and read their magnetic state as fast and as energy-efficiently as possible. This is because magnets remain the best way, that we know of, to store digital data for a long time.

“Our ERC project, PICaSSO, explores new ways to ‘write’ magnets at low temperature by interfacing them with superconductors. Although this research is still at an early stage, it would allow the development of ultra-energy-efficient cryogenic memories, a necessary requirement for the realistic scaling of quantum computers.

“I am absolutely delighted to have been awarded a consolidator grant. It is an incredible opportunity to do great science and an important recognition of the work of my amazing team.”

Professor Rosana Collepardo-Guevara

Rosana Collepardo-Guevara is Professor of Computational and Molecular Biophysics at the Yusuf Hamied Department of Chemistry and the Department of Genetics. She is a Winton Advanced Research Fellow in physics, a director of postgraduate education for chemistry and a Fellow of Clare College. She said: “My group investigates the connection between genome structure and function by developing computer models and algorithms that can bridge scales, from atoms to genes, while considering the extensive chemical diversity of the genome.

“We will investigate the transformative hypothesis of phase transitions in genome organisation, which suggests that our genes are organised inside functionally diverse liquid drops. We will develop new computer models to probe how the physical properties of these droplets are regulated, and how this may contribute to the tight regulation of our genes.

“I am truly delighted and proud of my team. This success is owed to the exceptional students and postdocs that I’ve had the privilege to supervise over the years, and also to the support of my mentors, collaborators, and family. This grant will give us the opportunity to keep exploring radical ideas.”

Professor Jason Miller

Jason Miller is a professor in the Statistics Laboratory and a Fellow of Trinity College. He said: “My research is at the interface of probability theory with complex analysis, combinatorics, and geometry. The questions I study arise from models in statistical physics which are exactly at a critical point between a phase transition.

“My ERC project will be investigating critical random media in two dimensions, including models of how fluid flows through a porous medium and how the spins organise themselves in a magnet. The focus will be the study of their fractal structure and diffusion properties.

“I am very pleased to have received the grant. With the support that it provides, I will be able to form a research group to tackle longstanding questions in the area.”

Dr Jenny Zhang

Dr Jenny Zhang is a BBSRC David Phillips Research Fellow at the Yusuf Hamied Department of Chemistry. She is a Fellow of Corpus Christi College. She said: “My team focuses on creating toolsets for rewiring the electrochemical pathways associated with living systems, particularly photosynthetic organisms. We do this to better understand fundamental bioenergetics and to manipulate them for various applications, such as in renewable energy generation.

“This ERC project develops an exciting new approach for accelerating the creation of synergistic interactions between biological and non-biological materials for highly efficient and robust energy exchange. The ultimate aim is to generate high performing biohybrid materials for clean energy generation.

“I am absolutely thrilled to be awarded this unique grant, which recognises all the key ingredients needed for innovation. This wonderful result was a cumulation of a lot of hard work, but also the generous support of my wonderful team and colleagues. I could not be more grateful for both the grant and the people I get to work with.”

Scientists at UK institutions have won the second greatest number of grants in Europe. Across Europe, the number of women receiving grants has increased for the third year running. 

“I extend my heartfelt congratulations to all the brilliant researchers who have been selected for ERC Consolidator Grants,” said Iliana Ivanova, European Commissioner for Innovation, Research, Culture, Education and Youth. “I'm especially thrilled to note the significant increase in the representation of women among the winners for the third consecutive year in this prestigious grant competition. This positive trend not only reflects the outstanding contributions of women researchers but also highlights the strides we are making towards a more inclusive and diverse scientific community.”

The ERC, set up by the European Union in 2007, is the premier European funding organisation for excellent frontier research. It funds creative researchers of any nationality and age, to run projects based across Europe.

The European Research Council (ERC) has awarded grants worth a total of €627 million to 308 researchers across Europe, of whom four are at the University of Cambridge.

This grant will give us the opportunity to keep exploring radical ideas.Professor Rosana Collepardo-GuevaraJenny Zhang - Nathan Pitt, University of CambridgeLeft to right: Professor Chiara Ciccarelli, Professor Jason Miller, Professor Rosana Collepardo-Guevara, and Dr Jenny Zhang


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Yes

Innovative aquaculture system turns waste wood into nutritious seafood

Mon, 20/11/2023 - 10:00

These long, white saltwater clams are the world’s fastest-growing bivalve and can reach 30cm long in just six months. They do this by burrowing into waste wood and converting it into highly-nutritious protein.

The researchers found that the levels of Vitamin B12 in the Naked Clams were higher than in most other bivalves – and almost twice the amount found in blue mussels.

And with the addition of an algae-based feed to the system, the Naked Clams can be fortified with omega-3 polyunsaturated fatty acids - nutrients essential for human health.

Shipworms have traditionally been viewed as a pest because they bore through any wood immersed in seawater, including ships, piers and docks.

The researchers developed a fully-enclosed aquaculture system that can be completely controlled, eliminating the water quality and food safety concerns often associated with mussel and oyster farming.

And the modular design means it can be used in urban settings, far from the sea.

“Naked Clams taste like oysters, they’re highly nutritious and they can be produced with a really low impact on the environment,” said Dr David Willer, Henslow Research Fellow at the University of Cambridge’s Department of Zoology and first author of the report.

He added: “Naked Clam aquaculture has never been attempted before. We’re growing them using wood that would otherwise go to landfill or be recycled, to produce food that’s high in protein and essential nutrients like Vitamin B12.”

Scientifically named Teredinids, these creatures have no shell, but are classed as bivalve shellfish and related to oysters and mussels.

Because the Naked Clams don’t put energy into growing shells, they grow much faster than mussels and oysters which can take two years to reach a harvestable size.

The report is published today in the journal Sustainable Agriculture.

Wild shipworms are eaten in the Philippines - either raw, or battered and fried like calamari. But for British consumers, the researchers think Naked Clams will be more popular as a ‘white meat’ substitute in processed foods like fish fingers and fishcakes.

“We urgently need alternative food sources that provide the micronutrient-rich profile of meat and fish but without the environmental cost, and our system offers a sustainable solution,” said Dr Reuben Shipway at the University of Plymouth’s School of Biological & Marine Sciences, senior author of the report.

He added: “Switching from eating beef burgers to Naked Clam nuggets may well become a fantastic way to reduce your carbon footprint.”

The research is a collaboration between the Universities of Cambridge and Plymouth, and has attracted funding from sources including The Fishmongers’ Company, British Ecological Society, Cambridge Philosophical Society, Seale-Hayne Trust, and BBSRC

The team is now trialling different types of waste wood and algal feed in their system to optimise the growth, taste and nutritional profile of the Naked Clams – and is working with Cambridge Enterprise to scale-up and commercialise the system.

Reference

Willer, D.F. et al: ‘Naked Clams to open a new sector in sustainable nutritious food production.’ Sustainable Agriculture, Nov 23. DOI: 10.1038/s44264-023-00004-y

Researchers hoping to rebrand a marine pest as a nutritious food have developed the world’s first system of farming shipworms, which they have renamed ‘Naked Clams’.

Naked Clams taste like oysters, they’re highly nutritious and they can be produced with a really low impact on the environment.Dr David WillerUniversity of PlymouthNaked Clams in wooden growth panel


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Experts predict ‘catastrophic ecosystem collapse’ of UK forests within the next 50 years if action not taken

Wed, 08/11/2023 - 00:05

A team of experts from across Europe has produced a list of 15 over-looked and emerging issues that are likely to have a significant impact on UK forests over the next 50 years.

This is the first ‘horizon scanning’ exercise – a technique to identify relatively unknown threats, opportunities, and new trends – of UK forests. The aim is to help researchers, practitioners, policymakers, and society in general, better prepare for the future and address threats before they become critical.

Dr Eleanor Tew, first author, visiting researcher at Cambridge’s Department of Zoology and Head of Forest Planning at Forestry England said: “The next 50 years will bring huge changes to UK forests: the threats they face, the way that we manage them, and the benefits they deliver to society.”

Forestry England, a part of the Forestry Commission, collaborated with the University of Cambridge on the study, which was published today in the journal, Forestry.

A panel comprising 42 experts, who represented a range of professions, organisations, and geographies, reached out to their networks to seek over-looked and emerging issues that were likely to affect UK forests over the next half a century. The resulting 180-item longlist was then whittled down through a series of review exercises to a shortlist of 30 issues. In a final workshop, panellists identified the top 15 issues they believed were likely to have the greatest impact on UK forests in the next 50 years.

The research method did not support the overall ranking of the 15 issues in order of importance or likelihood of occurrence. However, when the issues were scored individually by the panel of experts, it was notable that ‘catastrophic forest ecosystem collapse’ was the most highly ranked issue, with 64% of experts ranking it as their top issue and 88% ranking it within their top three.

‘Catastrophic forest ecosystem collapse’ refers to multiple interrelated hazards that have a cascading effect on forests, leading to their total or partial collapse. This has already been witnessed in continental Europe and North America.

Tew said: “We hope the results from this horizon scanning exercise serve as an urgent call to action to build on, and dramatically upscale, action to increase forest resilience.”

Another issue identified was that droughts caused by climate change may lead to competition for water resources between forests and society. On the other hand, forests may help to mitigate the impact of floods caused by climate change.

Tree viral diseases were also identified as an issue. In the UK, pests and pathogens are increasing due to globalisation and climate change, with viruses and viroids (RNA molecules) being the largest group on the UK Plant Health Risk Register. However, little is known about how viral diseases affect forest tree species and indeed the wider ecosystem.

A further issue was the effect of climate change on forest management, with extreme weather leading to smaller windows of time when forestry can be carried out. Experts warn that the seasons for carrying out work such as harvesting and thinning are getting narrower as we see wetter winters and scorching summers.

However not all emerging issues are threats – some are new opportunities. For example, trees will be at the heart of future urban planning. Experts predict that ‘forest lungs’ will be created thanks to an increased understanding of the benefits of trees for society. They say there will likely be a greater blurring of boundaries between urban and rural areas, with an increase in green infrastructure and connectivity.

International commitments around nature are also likely to have repercussions at the local level. For example, the mandatory reporting of companies’ supply chain impacts on nature, such as through the new framework being developed by the Taskforce on Nature-related Financial Disclosures (TNFD), could create additional incentives for nature-friendly forest management.

Tew concluded: “These results are both concerning and exciting. However, we should be optimistic, remembering that these are possibilities and not certainties. Crucially, we have time to act ‒ by responding to the threats and embracing the opportunities, future generations can have resilient forests with all the benefits they offer.”

Senior author and pioneer of horizon scanning, Professor Bill Sutherland, from the Department of Zoology at the University of Cambridge said: “We are already seeing dramatic events in Europe’s forests whether fires, disease or bark beetles, whilst the importance of trees is increasingly recognised. Horizon scanning to identify future issues is key, especially as trees planted now will face very different circumstances as they mature in scores of years.”

This research was funded by Forestry England. The Forestry Commission are bringing the sector together in 2024 to look at next steps.

Other threats to UK forests include competition with society for water, viral diseases, and extreme weather affecting forest management.

The next 50 years will bring huge changes to UK forests: the threats they face, the way that we manage them, and the benefits they deliver to society.Dr Eleanor Tew, visiting researcher at Cambridge’s Department of Zoology and Head of Forest Planning at Forestry EnglandGraham Custance Photography / Moment via Getty Images Ashridge, Hertfordshire, UK


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Yes

Offset markets: new approach could help save tropical forests by restoring faith in carbon credits

Mon, 30/10/2023 - 16:15

A new approach to valuing the carbon storage potential of natural habitats aims to help restore faith in offset schemes, by enabling investors to directly compare carbon credit pricing across a wide range of projects.

Current valuation methods for forest conservation projects have come under heavy scrutiny, leading to a crisis of confidence in carbon markets. This is hampering efforts to offset unavoidable carbon footprints, mitigate climate change, and scale up urgently needed investment in tropical forest conservation.

Measuring the value of carbon storage is not easy. Recent research revealed that as little as 6% of carbon credits from voluntary REDD+ schemes result in preserved forests. And the length of time these forests are preserved is critical to the climate benefits achieved.

Now, a team led by scientists at the University of Cambridge has invented a more reliable and transparent way of estimating the benefit of carbon stored because of forest conservation.  

The method is published today in the journal Nature Climate Change. In it, the researchers argue that saving tropical forests is not only vital for biodiversity, but also a much less expensive way of balancing emissions than most of the current carbon capture and storage technologies.

The new approach works a bit like a lease agreement: carbon credits are issued to tropical forest projects that store carbon for a predicted amount of time. The valuation is front-loaded, because more trees protected now means less carbon released to the atmosphere straight away.

The technique involves deliberately pessimistic predictions of when stored carbon might be released, so that the number of credits issued is conservative. But because forests can now be monitored by remote sensing, if projects do better than predicted – which they usually will – they can be rewarded through the issue of further credits.

The payments encourage local people to protect forests: the carbon finance they receive can help provide alternative livelihoods that don’t involve cutting down trees.

And by allowing for future payments, the new method generates incentives for safeguarding forests long after credits have been issued. This contrasts with the current approach, which passes on a burden for conservation to future generations without compensation for lost livelihoods.

The approach also allows different types of conservation projects to be compared in a like-for-like manner.

“Until now there hasn’t been a satisfactory way of directly comparing technological solutions with nature-based solutions for carbon capture. This has caused a lack of enthusiasm for investing in carbon credits linked to tropical forest protection,” said Dr Tom Swinfield, a researcher in the University of Cambridge’s Department of Zoology and senior author of the study.

He added: “Tropical forests are being cleared so quickly that if we don’t protect them now, we’re not going to make the vital progress we need towards net-zero. Buying carbon credits linked to their protection is one of the best ways to do this.”

Tropical forests play a key role in taking carbon dioxide out of the atmosphere, helping to reduce global warming and avert climate catastrophe. But the carbon they capture is not taken out of the atmosphere permanently: forests can be destroyed by pests, floods, fire, wind – and by human clearance.

This impermanence, and therefore the difficulty of reliably measuring the long-term climate benefit of tropical forest protection, has made it an unattractive proposition for investors wanting to offset their carbon emissions.

And this is despite it being a far cheaper investment than more permanent, technology-based methods of carbon capture and storage.

Protection of tropical forests, a nature-based solution to climate change, comes with additional benefits: helping to conserve biodiversity, and supporting the livelihoods of people living near the forests.

“Nature-based carbon solutions are highly undervalued right now because the market doesn’t know how to account for the fact that forests aren’t a permanent carbon storage solution. Our method takes away a lot of the uncertainties,” said Anil Madhavapeddy, a Professor in the University of Cambridge’s Department of Computer Science and Technology, who was involved in the study.

The new method, developed by scientists at the Universities of Cambridge and Exeter and the London School of Economics, is called ‘Permanent Additional Carbon Tonne' (PACT) accounting, and can be used to value a wide range of nature-based solutions.

“Carbon finance is a way for us – the carbon emitters of the richer world – to direct funds towards rural communities in the tropics so they can get more out of the land they have, without cutting down more trees,” said Andrew Balmford, Professor of Conservation Science at the University of Cambridge and first author of the paper.

Co-author Srinivasan Keshav, Robert Sansom Professor of Computer Science at Cambridge added: “Our new approach has the potential to address market concerns around nature-based solutions to carbon offsetting, and lead to desperately needed investment.”

Conversion of tropical forest to agricultural land results in vast carbon emissions. Around 30% of all progress towards the ambitious net-zero commitments made at COP26 is reliant on better management of carbon in nature.

Other carbon credit investment options include technologies that remove carbon dioxide from the atmosphere and lock it deep in the Earth for hundreds of years. These permanent storage options may currently be easier to value, say the researchers, but they typically cost substantially more than nature-based solutions and do nothing to protect natural habitats that are vital in regulating the global climate and mitigating the extinction crisis.

The research was funded primarily by the Tezos Foundation. It was conducted by researchers at the Cambridge Centre for Carbon Credits.

Reference: Balmford, A. et al.: ‘Realising the social value of impermanent carbon credits.’ Nature Climate Change, October 2023. DOI: 10.1038/s41558-023-01815-0

 

Srinivasan Keshav explains more about the work here. More information about Cambridge PACT.

A new way to price carbon credits could encourage desperately needed investment in forest preservation and boost vital progress towards net-zero.

Our new approach has the potential to address market concerns around nature-based solutions to carbon offsetting.Srinivasan KeshavMarije SchaafsmaTropical forest in Tanzania


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YesLicence type: Attribution-Noncommerical

Getting maximum calories in shortest time is the priority for bumblebees

Tue, 24/10/2023 - 16:05

A new study investigating nectar drinking in one of the most common bumblebees in the UK, Bombus terrestris, has found that when foraging they maximise the amount of nectar sugar they take back to the colony each minute.

To make their choices, the bumblebees trade off the time they spend collecting nectar with the energy content of that nectar. This means they will forage to collect nectar that’s hard to access – but only if the sugar content of that nectar makes it worth doing so.

This big-and-fast approach contrasts with honeybee foraging: honeybees make their decisions by optimising their individual energy expenditure for any nectar they collect. This more measured approach should prolong the honeybee’s working life.

“As they forage, bumblebees are making decisions about which nectar sources will give the greatest immediate energetic return, rather than optimising the energy efficiency of their foraging,” said Dr Jonathan Pattrick, joint first author of the report, who started the research while in the University of Cambridge’s Department of Plant Sciences.

Pattrick, now based at the University of Oxford, added: “Our results allow us to make predictions about the sorts of flowers the bumblebees are likely to visit, which could inform the choice of which flowers to plant in field margins to support these important pollinators. It’s also relevant to crop breeders who want to make varieties that are ‘better’ for bumblebees.”

The results are published today in the journal iScience.

Over six months the researchers made 60,000 behavioural observations of the bumblebees, allowing them to precisely estimate bumblebee foraging energetics. It was painstaking work: each bumblebee in the study was watched for up to eight hours a day without a break.

The team used vertically and horizontally oriented artificial flowers, with surfaces that were slippery and difficult for the bumblebees to grip.

A custom computer program allowed the team to measure the split-second timing as the bumblebees flew between the artificial flowers and foraged from them. This meant the team could track how much energy the bumblebees spent flying as well as how much they collected when drinking, and identify how the bumblebees decided whether to spend extra time and energy collecting high-sugar nectar from slippery flowers, or take the easier option of collecting lower-sugar nectar from flowers they could land on.

 

 

“It’s amazing that even with a brain smaller than a sesame seed, bumblebees can make such complex decisions,” said Dr Hamish Symington in the University of Cambridge’s Department of Plant Sciences and joint first author of the report.

He added: “It’s clear that bumblebee foraging isn’t based on a simple idea that ‘the more sugar there is in nectar, the better’ – it’s much more subtle than that. And it highlights that there’s still so much to learn about insect behaviour.”

Individual bumblebees were given one of three tests. In the first test, the nectar on both vertical and horizontal artificial flowers had the same amount of sugar, and the bumblebees made the obvious choice to forage from the horizontal flowers, rather than spend extra time and energy hovering at the vertical ones. In the second test, the nectar on the vertical flowers was much more sugary than the nectar on the horizontal flowers, and the bumblebees chose to drink almost exclusively from the vertical flowers.

In the third test, the vertical flowers offered nectar which was only slightly more sugary than the horizontal flowers. This created a situation in which the bumblebees had to make a trade-off between the time and energy they spent foraging and the energy in the nectar they were drinking – and they switched to feeding from the horizontal flowers.

The results show that bumblebees can choose to spend additional time and energy foraging from hard-to-access nectar sources – but only if the reward is worth it.

Bumblebees drink nectar from flowers, then offload it in their nest – by regurgitation – for use by other bumblebees in the nest. Unlike honeybees, bumblebees only store a small amount of nectar in the nest, so they need to make the most of every opportunity to forage.

This research was funded by BBSRC.

Reference

Pattrick, J.G. et al: ‘Bumblebees negotiate a trade-off between nectar quality and floral biomechanics.’ iScience, Oct 23. DOI: 10.1016/j.isci.2023.108071

Research has found that bumblebees make foraging choices to collect the most sugar from flowers in the shortest time – even if that means using more energy in the process – to provide an immediate energy boost for the colony.

It’s amazing that even with a brain smaller than a sesame seed, bumblebees can make such complex decisions.Hamish SymingtonBumblebee foraging for nectar


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Vulnerability to different COVID-19 mutations depends on previous infections and vaccination, study suggests

Fri, 06/10/2023 - 09:00

A new study has found that people differ in how vulnerable they are to different mutations in emerging variants of SARS-CoV-2.

This is because the variant of SARS-CoV-2 a person was first exposed to determines how well their immune system responds to different parts of the virus, and how protected they are against other variants.

It also means that the same COVID-19 vaccine might work differently for different people, depending on which variants of SARS-CoV-2 they have previously been exposed to and where their immune response has focused.

The discovery underlies the importance of continuing surveillance programmes to detect the emergence of new variants, and to understand differences in immunity to SARS-CoV-2 across the population.

It will also be important for future vaccination strategies, which must consider both the virus variant a vaccine contains and how immune responses of the population may differ in their response to it.

“It was a surprise how much of a difference we saw in the focus of immune responses of different people to SARS-CoV-2. Their immune responses appear to target different specific regions of the virus, depending on which variant their body had encountered first,” said Dr Samuel Wilks at the University of Cambridge’s Centre for Pathogen Evolution in the Department of Zoology, first author of the report.

He added: “Our results mean that if the virus mutates in a specific region, some people’s immune system will not recognize the virus as well - so it could make them ill, while others may still have good protection against it.”

The research, published today in the journal Science, involved a large-scale collaboration across ten research institutes including the University of Cambridge and produced a comprehensive snapshot of early global population immunity to COVID-19.

Researchers collected 207 serum samples - extracted from blood samples - from people who had either been infected naturally with one of the many previously circulating SARS-CoV-2 variants, or who had been vaccinated against SARS-CoV-2 with different numbers of doses of the Moderna vaccine.

They then analysed the immunity these people had developed, and found significant differences between immune responses depending on which variant a person had been infected with first.

“These results give us a deep understanding of how we might optimise the design of COVID-19 booster vaccines in the future,” said Professor Derek Smith, Director of the University of Cambridge’s Centre for Pathogen Evolution in the Department of Zoology, senior author of the report.

He added: “We want to know the key virus variants to use in vaccines to best protect people in the future.”

The research used a technique called ‘antigenic cartography’ to compare the similarity of different variants of the SARS-CoV-2 virus. This measures how well human antibodies, formed in response to infection with one virus, respond to infection with a variant of that virus. It shows whether the virus has changed enough to escape the human immune response and cause disease.

The resulting ‘antigenic map’ shows the relationship between a wide selection of SARS-CoV-2 variants that have previously circulated. Omicron variants are noticeably different from the others – which helps to explain why many people still succumbed to infection with Omicron despite vaccination or previous infection with a different variant.

Immunity to COVID-19 can be acquired by having been infected with SARS-CoV-2 or by vaccination. Vaccines provide immunity without the risk from the disease or its complications. They work by activating the immune system so it will recognise and respond rapidly to exposure to SARS-CoV-2 and prevent it causing illness. But, like other viruses, the SARS-CoV-2 virus keeps mutating to try and escape human immunity.

During the first year of the pandemic, the main SARS-CoV-2 virus in circulation was the B.1 variant. Since then, multiple variants emerged that escaped pre-existing immunity, causing reinfections in people who had already had COVID.

“The study was an opportunity to really see - from the first exposure to SARS-CoV-2 onwards - what the basis of people’s immunity is, and how this differs across the population,” said Wilks.

This research was funded by the National Institute of Allergy and Infectious Diseases and National Institutes of Health.

Reference

Wilks, S.H. et al: ‘Mapping SARS-CoV-2 antigenic relationships and serological responses.’ Science, October 2023. DOI: 10.1126/science.adj0070

A person’s immune response to variants of SARS-CoV-2, the virus that causes COVID-19, depends on their previous exposure – and differences in the focus of immune responses will help scientists understand how to optimise vaccines in the future to provide broad protection.

It was a surprise how much of a difference we saw in the focus of immune responses of different people to SARS-CoV-2.Sam WilksAlexandra Koch on PixabayVirus variants


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YesLicence type: Attribution-Noncommerical

Drier savannas and grasslands store more climate-buffering carbon than previously thought

Sat, 30/09/2023 - 17:17

The study estimates that soils in savanna-grassland regions worldwide have gained 640 million metric tons of stored carbon over the past two decades.

This is because over the last 20 years, fire suppression has led to smaller wildfires, and less burned area in drier savannas and grasslands. 

When soil microbes break down fallen leaves, dead plant matter and roots, the carbon in this plant biomass is released and can associate with minerals in the soil to become very stable. But the energy of an intense fire can burn it back off, releasing carbon dioxide into the atmosphere.

Fires are being suppressed because of population expansion, and landscape fragmentation caused by the introduction of roads, croplands and pastures in savannas and grasslands.

The study, published today in the journal Nature Climate Change, is based on a reanalysis of datasets from 53 long-term fire-manipulation experiments worldwide, as well as field-sampling at six of those sites.

“We found that the potential - at very high fire frequencies - to release soil carbon into the atmosphere as carbon dioxide is greatest in dry areas. The potential to store carbon in soil when fires are less frequent is also the greatest in these dry areas,” said Dr Adam Pellegrini in the Department of Plant Sciences at the University of Cambridge, and lead author of the study.

The reduction in the size and frequency of wildfires in dryland savannas has led to an estimated 23% increase in carbon stored in topsoil. This increase was not foreseen by most of the state-of-the-art ecosystem models used by climate researchers. As a result, the researchers say, the climate-buffering impacts of dryland savannas are likely to have been underestimated.

Soil contains at least three times more organic carbon than the atmosphere or terrestrial plants, making it an important global carbon pool.

"Our findings show that because drier savannas are more sensitive to changes in fires, the decreases in burned area in those ecosystems has resulted in soils storing more carbon than they are releasing,” said Pellegrini.  

He added: “Many of the ecosystem models that are used in simulating the effects of global change on carbon cycling are unlikely to have captured these dynamics."

The study involved twenty researchers from institutions around the globe, who looked at recent changes in burned area and fire frequency in savannas, other grasslands, seasonal woodlands and forests.

Across 888,000 square miles (2.3 million square kilometers) of dryland savanna-grasslands, where fire frequency and burned area declined over the past two decades, soil carbon rose by an estimated 23%.

But in more humid savanna-grassland regions covering 533,000 square miles (1.38 million square kilometers), more frequent wildfires and increased burned area resulted in an estimated 25% loss in soil carbon over the past two decades.

The net change during that time was a gain of 0.64 petagrams, or 640 million metric tons, of soil carbon. 

“In the past couple of decades, global savannas and grasslands have slowed climate warming more than they have accelerated it, despite fires. But there is absolutely no guarantee that this will continue in the future,” said Peter Reich, Director of the Institute for Global Change Biology at the University of Michigan, who was also involved in the study. 

“No single region – from the Amazon rainforest, to the US Great Plains grasslands to Canada’s boreal forest - can alone store sufficient carbon to make a large contribution to slowing climate change. But together, they can,” said Pellegrini.

He added: “There are several savanna and grassland regions where soil carbon-credit projects are being developed, so understanding their capacity to sequester carbon is relevant to those regions.”

This research was funded by the U.S. Department of Agriculture, United Kingdom Research and Innovation (UKRI), the Gordon and Betty Moore Foundation, and the US Department of Energy. 

Reference: Pellegrini, A.F.A, et al.: 'Soil carbon storage capacity of drylands under altered fire regimes.’ Nature Climate Change, October 2023. DOI: 10.1038/s41558-023-01800-7

Adapted from a press release by the University of Michigan.

 

Learn more about Adam Pellegrini’s work.

 

Savannas and grasslands in drier climates around the world store more carbon than scientists previously thought and are helping to slow the rate of climate warming, according to a new study.

Because drier savannas are more sensitive to changes in fires, the decreases in burned area in those ecosystems has resulted in soils storing more carbon than they are releasingAdam PellegriniAdam PellegriniFire in oak savannah


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YesLicence type: Attribution

New vaccine technology could protect from future viruses and variants

Mon, 25/09/2023 - 16:10

The vaccine antigen technology, developed by the University of Cambridge and spin-out DIOSynVax in early 2020, provided protection against all known variants of SARS-CoV-2 – the virus that causes COVID-19 – as well as other major coronaviruses, including those that caused the first SARS epidemic in 2002.

The studies in mice, rabbits and guinea pigs – an important step before beginning human clinical trials, currently underway in Southampton and Cambridge – found that the vaccine candidate provided a strong immune response against a range of coronaviruses by targeting the parts of the virus that are required for replication. The vaccine candidate is based on a single digitally designed and immune-optimised antigen.

Even though the vaccine was designed before the emergence of the Alpha, Beta, Gamma, Delta and Omicron variants of SARS-CoV-2, it provided a strong protection against all of these and against more recent variants, suggesting that vaccines based on DIOSynVax antigens may also protect against future SARS-CoV-2 variants.

DIOSynVax (Digitally Immune Optimised Synthetic Vaccines) uses a combination of computational biology, protein structure, immune optimisation, and synthetic biology to maximise and widen the spectrum of protection that vaccines can provide against global threats including existing and future virus outbreaks. Its vaccine candidates can be deployed in a variety of vaccine delivery and manufacturing platforms. The results are reported in the journal Nature Biomedical Engineering.

Since the SARS outbreak in 2002, coronavirus ‘spillovers’ from animals to humans have been a threat to public health, and require vaccines that provide broad-based protection. “In nature, there are lots of these viruses just waiting for an accident to happen,” said Professor Jonathan Heeney from Cambridge’s Department of Veterinary Medicine, who led the research. “We wanted to come up with a vaccine that wouldn’t only protect against SARS-CoV-2, but all its relatives.”

All currently available vaccines, such as the seasonal flu vaccine and existing Covid-19 vaccines, are based on virus strains or variants that arose at some point in the past. “However, viruses are mutating and changing all the time,” said Heeney. “Current vaccines are based on a specific isolate or variant that occurred in the past, it’s possible that a new variant will have arisen by the time we get to the point that the vaccine is manufactured, tested and can be used by people.”

Heeney’s team has been developing a new approach to coronavirus vaccines, by targeting their ‘Achilles heel’. Instead of targeting just the spike proteins on the virus that change to evade our immune system, the Cambridge vaccine targets the critical regions of the virus that it needs to complete its virus life cycle. The team identifies these regions through computer simulations and selecting conserved structurally engineered antigens. “This approach allows us to have a vaccine with a broad effect that viruses will have trouble getting around,” said Heeney.

Using this approach, the team identified a unique antigen structure that gave a broad-based immune responses against different Sarbeco coronaviruses, the large group of SARS and SARS-CoV-2 related viruses that occur in nature. The optimised antigen is compatible with all vaccine delivery systems: the team administered it as a DNA immunogen (in collaboration with the University of Regensburg), a weakened version of a virus (Modified Vaccinia Ankara, supported by ProBiogen), and as an mRNA vaccine (in collaboration with Ethris). In all cases, the optimised antigen generated a strong immune response in mice, rabbits and guinea pigs against a range of coronaviruses. Based on a strong safety profile, the "first-in-human" clinical trials are ongoing at Southampton and Cambridge NIHR Clinical Research Facilities. The last booster immunisations will conclude by the end of September.

“Unlike current vaccines that use wild-type viruses or parts of viruses that have caused trouble in the past, this technology combines lessons learned from nature’s mistakes and aims to protect us from the future,” said Heeney. “These optimised synthetic antigens generate broad immune responses, targeted to the key sites of the virus that can’t change easily. It opens the door for vaccines against viruses that we don’t yet know about. This is an exceptionally different vaccine technology – it’s a real turning point.”

The research was initially funded by the DHSC UK Vaccine Network programme and later in part by the Innovate UK DIOS-CoVax programme. The DIOSynVax pipeline includes vaccine candidates for influenza viruses, haemorrhagic fever viruses, and coronaviruses including SARS-CoV-2, the latter of which is currently in clinical trials.

DIOSynVax is a spin-out company from the University of Cambridge, established in 2017 with the support of Cambridge Enterprise, the University’s commercialisation arm. Jonathan Heeney is the Professor of Comparative Pathology at the University of Cambridge, and a Fellow at Darwin College.

Reference:
Sneha Vishwanath et al. ‘A computationally designed antigen eliciting broad humoral responses against SARS-CoV-2 and related sarbecoviruses.’ Nature Biomedical Engineering (2023). DOI: 10.1038/s41551-023-01094-2

Studies of a ‘future-proof’ vaccine candidate have shown that just one antigen can be modified to provide a broadly protective immune response in animals. The studies suggest that a single vaccine with combinations of these antigens – a substance that causes the immune system to produce antibodies against it – could protect against an even greater range of current and future coronaviruses.

This is an exceptionally different vaccine technology – it’s a real turning pointJonathan HeeneyUma Shankar sharma via Getty ImagesVirus mutation


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Developing ‘kinder’ treatments for a devastating childhood cancer

Wed, 20/09/2023 - 16:00

Neuroblastomas can be devastating to children and their families and the treatments can be harsh. But thanks to scientists, some tadpoles and a little poetry, improved treatments could soon be on their way.

Explore life in the Universe

Mon, 18/09/2023 - 11:00

A new postgraduate programme will train researchers to understand life's origins, search for habitable planets and consider the most profound question of all: are we alone?

Microbiome: the kingdom of the gut

Thu, 24/08/2023 - 09:50

What's so special about the bacteria in our bowels?